# Copyright 2017 Google Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

# NOTE: This class is auto generated by the swagger code generator program.
# https://github.com/swagger-api/swagger-codegen.git
# Do not edit the class manually.

defmodule GoogleApi.Genomics.V1.Model.VariantSet do
  @moduledoc """
  A variant set is a collection of call sets and variants. It contains summary statistics of those contents. A variant set belongs to a dataset.

  ## Attributes

  - datasetId (String.t): The dataset to which this variant set belongs. Defaults to: `null`.
  - description (String.t): A textual description of this variant set. Defaults to: `null`.
  - id (String.t): The server-generated variant set ID, unique across all variant sets. Defaults to: `null`.
  - metadata ([VariantSetMetadata]): The metadata associated with this variant set. Defaults to: `null`.
  - name (String.t): User-specified, mutable name. Defaults to: `null`.
  - referenceBounds ([ReferenceBound]): A list of all references used by the variants in a variant set with associated coordinate upper bounds for each one. Defaults to: `null`.
  - referenceSetId (String.t): The reference set to which the variant set is mapped. The reference set describes the alignment provenance of the variant set, while the `referenceBounds` describe the shape of the actual variant data. The reference set's reference names are a superset of those found in the `referenceBounds`.  For example, given a variant set that is mapped to the GRCh38 reference set and contains a single variant on reference 'X', `referenceBounds` would contain only an entry for 'X', while the associated reference set enumerates all possible references: '1', '2', 'X', 'Y', 'MT', etc. Defaults to: `null`.
  """

  use GoogleApi.Gax.ModelBase

  @type t :: %__MODULE__{
          :datasetId => any(),
          :description => any(),
          :id => any(),
          :metadata => list(GoogleApi.Genomics.V1.Model.VariantSetMetadata.t()),
          :name => any(),
          :referenceBounds => list(GoogleApi.Genomics.V1.Model.ReferenceBound.t()),
          :referenceSetId => any()
        }

  field(:datasetId)
  field(:description)
  field(:id)
  field(:metadata, as: GoogleApi.Genomics.V1.Model.VariantSetMetadata, type: :list)
  field(:name)
  field(:referenceBounds, as: GoogleApi.Genomics.V1.Model.ReferenceBound, type: :list)
  field(:referenceSetId)
end

defimpl Poison.Decoder, for: GoogleApi.Genomics.V1.Model.VariantSet do
  def decode(value, options) do
    GoogleApi.Genomics.V1.Model.VariantSet.decode(value, options)
  end
end

defimpl Poison.Encoder, for: GoogleApi.Genomics.V1.Model.VariantSet do
  def encode(value, options) do
    GoogleApi.Gax.ModelBase.encode(value, options)
  end
end