# Copyright 2017 Google Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.


# NOTE: This class is auto generated by the swagger code generator program.
# https://github.com/swagger-api/swagger-codegen.git
# Do not edit the class manually.

defmodule GoogleApi.Genomics.V1.Model.VariantSet do
  @moduledoc """
  A variant set is a collection of call sets and variants. It contains summary statistics of those contents. A variant set belongs to a dataset.  For more genomics resource definitions, see [Fundamentals of Google Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

  ## Attributes

  - datasetId (String): The dataset to which this variant set belongs. Defaults to: `null`.
  - description (String): A textual description of this variant set. Defaults to: `null`.
  - id (String): The server-generated variant set ID, unique across all variant sets. Defaults to: `null`.
  - metadata (List[VariantSetMetadata]): The metadata associated with this variant set. Defaults to: `null`.
  - name (String): User-specified, mutable name. Defaults to: `null`.
  - referenceBounds (List[ReferenceBound]): A list of all references used by the variants in a variant set with associated coordinate upper bounds for each one. Defaults to: `null`.
  - referenceSetId (String): The reference set to which the variant set is mapped. The reference set describes the alignment provenance of the variant set, while the `referenceBounds` describe the shape of the actual variant data. The reference set's reference names are a superset of those found in the `referenceBounds`.  For example, given a variant set that is mapped to the GRCh38 reference set and contains a single variant on reference 'X', `referenceBounds` would contain only an entry for 'X', while the associated reference set enumerates all possible references: '1', '2', 'X', 'Y', 'MT', etc. Defaults to: `null`.
  """

  defstruct [
    :"datasetId",
    :"description",
    :"id",
    :"metadata",
    :"name",
    :"referenceBounds",
    :"referenceSetId"
  ]
end

defimpl Poison.Decoder, for: GoogleApi.Genomics.V1.Model.VariantSet do
  import GoogleApi.Genomics.V1.Deserializer
  def decode(value, options) do
    value
    |> deserialize(:"metadata", :list, GoogleApi.Genomics.V1.Model.VariantSetMetadata, options)
    |> deserialize(:"referenceBounds", :list, GoogleApi.Genomics.V1.Model.ReferenceBound, options)
  end
end

defimpl Poison.Encoder, for: GoogleApi.Genomics.V1.Model.VariantSet do
  def encode(value, options) do
    GoogleApi.Genomics.V1.Deserializer.serialize_non_nil(value, options)
  end
end