google_api_genomics v0.5.0 GoogleApi.Genomics.V1.Model.VariantSet View Source

A variant set is a collection of call sets and variants. It contains summary statistics of those contents. A variant set belongs to a dataset.

Attributes

  • datasetId (String.t): The dataset to which this variant set belongs. Defaults to: null.
  • description (String.t): A textual description of this variant set. Defaults to: null.
  • id (String.t): The server-generated variant set ID, unique across all variant sets. Defaults to: null.
  • metadata ([VariantSetMetadata]): The metadata associated with this variant set. Defaults to: null.
  • name (String.t): User-specified, mutable name. Defaults to: null.
  • referenceBounds ([ReferenceBound]): A list of all references used by the variants in a variant set with associated coordinate upper bounds for each one. Defaults to: null.
  • referenceSetId (String.t): The reference set to which the variant set is mapped. The reference set describes the alignment provenance of the variant set, while the `referenceBounds` describe the shape of the actual variant data. The reference set's reference names are a superset of those found in the `referenceBounds`. For example, given a variant set that is mapped to the GRCh38 reference set and contains a single variant on reference 'X', `referenceBounds` would contain only an entry for 'X', while the associated reference set enumerates all possible references: '1', '2', 'X', 'Y', 'MT', etc. Defaults to: null.

Link to this section Summary

Functions

Unwrap a decoded JSON object into its complex fields.

Link to this section Types

Link to this type

t() View Source
t() :: %GoogleApi.Genomics.V1.Model.VariantSet{
  datasetId: any(),
  description: any(),
  id: any(),
  metadata: [GoogleApi.Genomics.V1.Model.VariantSetMetadata.t()],
  name: any(),
  referenceBounds: [GoogleApi.Genomics.V1.Model.ReferenceBound.t()],
  referenceSetId: any()
}

Link to this section Functions

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decode(value, options) View Source
decode(struct(), keyword()) :: struct()

Unwrap a decoded JSON object into its complex fields.