google_api_genomics v0.4.0 GoogleApi.Genomics.V1.Model.ReadGroup View Source

A read group is all the data that's processed the same way by the sequencer.

Attributes

  • info (%{optional(String.t) => [ErrorUnknown]}): A map of additional read group information. This must be of the form map<string, string[]> (string key mapping to a list of string values). Defaults to: null.
  • datasetId (String.t): The dataset to which this read group belongs. Defaults to: null.
  • description (String.t): A free-form text description of this read group. Defaults to: null.
  • experiment (Experiment): The experiment used to generate this read group. Defaults to: null.
  • id (String.t): The server-generated read group ID, unique for all read groups. Note: This is different than the @RG ID field in the SAM spec. For that value, see name. Defaults to: null.
  • name (String.t): The read group name. This corresponds to the @RG ID field in the SAM spec. Defaults to: null.
  • predictedInsertSize (integer()): The predicted insert size of this read group. The insert size is the length the sequenced DNA fragment from end-to-end, not including the adapters. Defaults to: null.
  • programs ([Program]): The programs used to generate this read group. Programs are always identical for all read groups within a read group set. For this reason, only the first read group in a returned set will have this field populated. Defaults to: null.
  • referenceSetId (String.t): The reference set the reads in this read group are aligned to. Defaults to: null.
  • sampleId (String.t): A client-supplied sample identifier for the reads in this read group. Defaults to: null.

Link to this section Summary

Functions

Unwrap a decoded JSON object into its complex fields.

Link to this section Types

Link to this type

t() View Source
t() :: %GoogleApi.Genomics.V1.Model.ReadGroup{
  datasetId: any(),
  description: any(),
  experiment: GoogleApi.Genomics.V1.Model.Experiment.t(),
  id: any(),
  info: map(),
  name: any(),
  predictedInsertSize: any(),
  programs: [GoogleApi.Genomics.V1.Model.Program.t()],
  referenceSetId: any(),
  sampleId: any()
}

Link to this section Functions

Link to this function

decode(value, options) View Source
decode(struct(), keyword()) :: struct()

Unwrap a decoded JSON object into its complex fields.